Dataset Open Access

Data publication: A deep-learning-based surrogate model for Monte-Carlo simulations of the linear energy transfer in primary brain tumor patients treated with proton-beam radiotherapy

Starke, Sebastian; Kieslich, Aaron Markus; Palkowitsch, Martina; Hennings, Fabian; Troost, Esther Gera Cornelia; Krause, Mechthild; Bensberg, Jona; Hahn, Christian; Heinzelmann, Feline; Bäumer, Christian; Lühr, Armin; Timmermann, Beate; Löck, Steffen


JSON Export

{
  "stats": {
    "volume": 3397546324.0, 
    "unique_downloads": 13.0, 
    "version_unique_downloads": 13.0, 
    "unique_views": 210.0, 
    "downloads": 15.0, 
    "version_unique_views": 210.0, 
    "version_views": 225.0, 
    "version_downloads": 15.0, 
    "version_volume": 3397546324.0, 
    "views": 225.0
  }, 
  "doi": "10.14278/rodare.2764", 
  "files": [
    {
      "bucket": "cb0665ed-43e9-4f45-9c28-dcc3c860f3ac", 
      "links": {
        "self": "https://rodare.hzdr.de/api/files/cb0665ed-43e9-4f45-9c28-dcc3c860f3ac/analysis_data.zip"
      }, 
      "size": 342692235, 
      "checksum": "md5:d0b670f5cee1de6f117919f2e83d92f9", 
      "type": "zip", 
      "key": "analysis_data.zip"
    }, 
    {
      "bucket": "cb0665ed-43e9-4f45-9c28-dcc3c860f3ac", 
      "links": {
        "self": "https://rodare.hzdr.de/api/files/cb0665ed-43e9-4f45-9c28-dcc3c860f3ac/water_phantom.zip"
      }, 
      "size": 93715492, 
      "checksum": "md5:75ae4c12df1ec734429e041cf0d50182", 
      "type": "zip", 
      "key": "water_phantom.zip"
    }
  ], 
  "conceptrecid": "2763", 
  "revision": 3, 
  "created": "2024-04-24T08:55:08.151330+00:00", 
  "links": {
    "badge": "https://rodare.hzdr.de/badge/doi/10.14278/rodare.2764.svg", 
    "doi": "https://doi.org/10.14278/rodare.2764", 
    "conceptbadge": "https://rodare.hzdr.de/badge/doi/10.14278/rodare.2763.svg", 
    "conceptdoi": "https://doi.org/10.14278/rodare.2763", 
    "bucket": "https://rodare.hzdr.de/api/files/cb0665ed-43e9-4f45-9c28-dcc3c860f3ac", 
    "html": "https://rodare.hzdr.de/record/2764", 
    "latest": "https://rodare.hzdr.de/api/records/2764", 
    "latest_html": "https://rodare.hzdr.de/record/2764"
  }, 
  "updated": "2024-04-25T06:18:17.021217+00:00", 
  "id": 2764, 
  "conceptdoi": "10.14278/rodare.2763", 
  "owners": [
    163
  ], 
  "metadata": {
    "relations": {
      "version": [
        {
          "last_child": {
            "pid_value": "2764", 
            "pid_type": "recid"
          }, 
          "index": 0, 
          "parent": {
            "pid_value": "2763", 
            "pid_type": "recid"
          }, 
          "count": 1, 
          "is_last": true
        }
      ]
    }, 
    "license": {
      "id": "CC-BY-4.0"
    }, 
    "title": "Data publication: A deep-learning-based surrogate model for Monte-Carlo simulations of the linear energy transfer in primary brain tumor patients treated with proton-beam radiotherapy", 
    "related_identifiers": [
      {
        "relation": "isIdenticalTo", 
        "scheme": "url", 
        "identifier": "https://www.hzdr.de/publications/Publ-38860"
      }, 
      {
        "relation": "isReferencedBy", 
        "scheme": "url", 
        "identifier": "https://www.hzdr.de/publications/Publ-38858"
      }, 
      {
        "relation": "isVersionOf", 
        "scheme": "doi", 
        "identifier": "10.14278/rodare.2763"
      }
    ], 
    "description": "<p>This repository contains the outputs and result data of our deep-learning-based experiments for the approximation of Monte-Carlo-simulated linear energy transfer distributions, which build the foundation for the corresponding article.</p>\n\n<p>The Pytorch checkpoint of our finally chosen SegResNet architecture trained on the UPTD dose distributions is located at dd_pbs/Dose-LETd/clip_let_below_0.04/segresnet/all_trainvalid_data/training/lightning_logs/version_6358843/checkpoints/last.ckpt.</p>\n\n<p>&nbsp;</p>\n\n<p>Moreover, we provide an exemplary data sample from a water phantom for trying our analysis pipeline.</p>", 
    "resource_type": {
      "type": "dataset", 
      "title": "Dataset"
    }, 
    "access_right_category": "success", 
    "pub_id": "38860", 
    "doi": "10.14278/rodare.2764", 
    "communities": [
      {
        "id": "rodare"
      }
    ], 
    "publication_date": "2024-03-15", 
    "creators": [
      {
        "orcid": "0000-0001-5007-1868", 
        "name": "Starke, Sebastian"
      }, 
      {
        "name": "Kieslich, Aaron Markus"
      }, 
      {
        "name": "Palkowitsch, Martina"
      }, 
      {
        "name": "Hennings, Fabian"
      }, 
      {
        "orcid": "0000-0001-9550-9050", 
        "name": "Troost, Esther Gera Cornelia"
      }, 
      {
        "orcid": "0000-0003-1776-9556", 
        "name": "Krause, Mechthild"
      }, 
      {
        "name": "Bensberg, Jona"
      }, 
      {
        "name": "Hahn, Christian"
      }, 
      {
        "name": "Heinzelmann, Feline"
      }, 
      {
        "name": "B\u00e4umer, Christian"
      }, 
      {
        "orcid": "0000-0002-9450-6859", 
        "name": "L\u00fchr, Armin"
      }, 
      {
        "name": "Timmermann, Beate"
      }, 
      {
        "orcid": "0000-0002-7017-3738", 
        "name": "L\u00f6ck, Steffen"
      }
    ], 
    "doc_id": "1", 
    "keywords": [
      "proton-beam therapy", 
      "relative biological effectiveness", 
      "linear energy transfer", 
      "NTCP models", 
      "deep learning", 
      "brain tumor"
    ], 
    "access_right": "open"
  }
}
225
15
views
downloads
All versions This version
Views 225225
Downloads 1515
Data volume 3.4 GB3.4 GB
Unique views 210210
Unique downloads 1313

Share

Cite as