2D and 3D convolutional neural networks for outcome modelling of locally advanced head and neck squamous cell carcinoma

Starke,Sebastian; Leger, Stefan; Zwanenburg, Alex; Leger, Karoline; Lohaus, Fabian; Linge, Annett; Schreiber, Andreas; Kalinauskaite, Goda; Tinhofer, Inge; Guberina, Nika; Guberina, Maja; Balermpas, Panagiotis; von der Grün, Jens; Ganswindt, Ute; Belka, Claus; Peeken, Jan C.; Combs, Stephanie E.; Böke, Simon; Zips, Daniel; Richter, Christian; Troost, Esther G.C.; Krause, Mechthild; Baumann, Michael; Löck, Steffen

These are the results from the analyses presented in a paper submitted to Scientific Reports. The zip file contains the trained model files and the plots that were used in the manuscript. Code for reproduction of our analyses can be obtained from https://github.com/oncoray/cnn-hnscc. There, you...

cupla - C++ User interface for the Platform independent Library Alpaka

Widera, René

cupla [qχɑpˈlɑʔ] is a simple user interface for the platform independent parallel kernel acceleration library alpaka. It follows a similar concept as the NVIDIA® CUDA® API by providing a software layer to manage accelerator devices. alpaka is used as backend for cupla.

2 more version(s) exist for this record

HZDR Data Management Strategy — Top-Level Architecture

Knodel, Oliver; Gruber, Thomas; Müller, Stefan E.; Juckeland, Guido

Top-Level Architecture of the proposed HZDR Data Management Strategy

2 more version(s) exist for this record

Mmpxrt; X-ray spectrometer simulation code with a detailed support of mosaic crystals.

Smid, Michal; Pan, Xiayun; Falk, Katerina

This is a a newly developed ray tracing code called mmpxrt, dedicated to study and design x-ray crystal optics, with a special focus on mosaic crystal spectrometers. Its main advantage over other currently available ray tracing codes is that it includes detailed and benchmarked algorithm to...

SPCI-Reconstruction

Kornek, Dominik; Berthold, Jonathan; Kögler, Toni

Single plane Compton imaging (SPCI) is a novel approach to medical imaging of gamma radiation [1]. The possible range of applications includes nuclear imaging and range verification in proton therapy. For the purpose of image reconstruction, a software tool written in ROOT [2] and named...

C++ & Python API for Scientific I/O with openPMD

Koller, Fabian; Poeschel, Franz; Huebl, Axel

openPMD is an open metadata format for open data workflows in open science. This library provides a common high-level API for openPMD writing and reading. It provides a common interface to I/O libraries and file formats such as HDF5 and ADIOS. Where supported, openPMD-api implements both serial...

16 more version(s) exist for this record

PIConGPU simulation settings for TWEAC

Debus, Alexander; Steiniger, Klaus; Pausch, Richard; Huebl, Axel; Widera, Rene

The input sets of the simulations as used in the publication "Circumventing the Dephasing and Depletion Limits of Laser-Wakefield Acceleration" by A. Debus et al. . The input sets include TWEAC scenarios, the LWFA scenario and the laser-propagation scenario of Appendix D. The src-directories...

Scalable, Data Driven Plasma Simulations with PIConGPU

Huebl, Axel; Widera, René; Garten, Marco; Pausch, Richard; Steiniger, Klaus; Bastrakov, Sergei; Meyer, Felix; Bastrakova, Ksenia; Debus, Alexander; Kluge, Thomas; Ehrig, Simeon; Werner, Matthias; Worpitz, Benjamin; Matthes, Alexander; Rudat, Sophie; Starke, Sebastian; Bussmann, Michael

PIConGPU is an open source, multi-platform particle-in-cell code scaling to the fastest supercomputers in the TOP500 list. We present the architecture, novel developments, and workflows that enable high-precision, fast turn-around computations on Exascale-machines. Furthermore, we present our...

Fast-neutron-induced fission cross section of Pu(242) measured at the neutron time-of-flight facility nELBE

Kögler, Toni

This dataset includes the processed data of the fast neutron-induced fission of Pu(242) experiement performed in November 2014 at the neutron time-of-flight facility nELBE which was published in T. Kögler et al., Phys. Rev. C 99, 024604 It contains the absolute (Pu242_nfis_Koegler_2019.csv) and...

Supplementary Data: Spectral Control via Multi-Species Effects in PW-Class Laser-Ion Acceleration

Huebl, Axel; Rehwald, Martin; Obst-Huebl, Lieselotte; Ziegler, Tim; Garten, Marco; Widera, René; Zeil, Karl; Cowan, Thomas E.; Bussmann, Michael; Schramm, Ulrich; Kluge, Thomas

Supplementary materials for our paper "Spectral Control via Multi-Species Effects in PW-Class Laser-Ion Acceleration". Additional high-resolution, raw HDF5 files using the openPMD standard (DOI:10.5281/zenodo.1167843) increase simulation output data to 4.7 TByte and are available from the...