Dataset Open Access

Data publication: Plant data of the Horizon 2020 project NEXT

Pospiech, Solveig; Middleton, Maarit


MARC21 XML Export

<?xml version='1.0' encoding='UTF-8'?>
<record xmlns="http://www.loc.gov/MARC21/slim">
  <leader>00000nmm##2200000uu#4500</leader>
  <controlfield tag="005">20251117174915.0</controlfield>
  <datafield tag="260" ind1=" " ind2=" ">
    <subfield code="c">2025-11-04</subfield>
  </datafield>
  <datafield tag="024" ind1=" " ind2=" ">
    <subfield code="a">10.14278/rodare.4073</subfield>
    <subfield code="2">doi</subfield>
  </datafield>
  <datafield tag="650" ind1="1" ind2="7">
    <subfield code="a">cc-by</subfield>
    <subfield code="2">opendefinition.org</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="a">10.3030/776804</subfield>
    <subfield code="i">isCitedBy</subfield>
    <subfield code="n">doi</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="a">https://www.hzdr.de/publications/Publ-42138</subfield>
    <subfield code="i">isIdenticalTo</subfield>
    <subfield code="n">url</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="a">https://www.hzdr.de/publications/Publ-42237</subfield>
    <subfield code="i">isReferencedBy</subfield>
    <subfield code="n">url</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="a">10.14278/rodare.4072</subfield>
    <subfield code="i">isVersionOf</subfield>
    <subfield code="n">doi</subfield>
  </datafield>
  <datafield tag="909" ind1="C" ind2="O">
    <subfield code="o">oai:rodare.hzdr.de:4073</subfield>
    <subfield code="p">openaire_data</subfield>
    <subfield code="p">user-energy</subfield>
    <subfield code="p">user-rodare</subfield>
  </datafield>
  <datafield tag="245" ind1=" " ind2=" ">
    <subfield code="a">Data publication: Plant data of the Horizon 2020 project NEXT</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">user-energy</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">user-rodare</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Middleton, Maarit</subfield>
    <subfield code="u">Geological Survey of Finland: Rovaniemi, FI</subfield>
    <subfield code="0">(orcid)0000-0002-9117-7690</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">dataset</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">data</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">plant</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">Finland</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">geochemistry</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">exploration</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">NEXT</subfield>
  </datafield>
  <datafield tag="100" ind1=" " ind2=" ">
    <subfield code="a">Pospiech, Solveig</subfield>
    <subfield code="u">HZDR</subfield>
    <subfield code="0">(orcid)0000-0003-2727-2375</subfield>
  </datafield>
  <datafield tag="540" ind1=" " ind2=" ">
    <subfield code="u">https://creativecommons.org/licenses/by/4.0/legalcode</subfield>
    <subfield code="a">Creative Commons Attribution 4.0 International</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">58431</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Common_juniper_needle_publication.csv</subfield>
    <subfield code="z">md5:256339b979c1a2a978252261e428b1f2</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">67772</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Common_juniper_twig_publication.csv</subfield>
    <subfield code="z">md5:a6578d8fc4e1fdd50f888d38978ec9b4</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">66357</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Norway_spruce_bark_publication.csv</subfield>
    <subfield code="z">md5:15ee0c5ed8000e8dcdbac4c8fa33e5d6</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">54890</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Norway_spruce_needle_publication.csv</subfield>
    <subfield code="z">md5:28ee78573d8bf2a9c2128236b81ae981</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">67849</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Norway_spruce_twig_publication.csv</subfield>
    <subfield code="z">md5:a3a12dfe6c0be13fdba5aa45581810b6</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">447</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Omnibus_results_table.RData</subfield>
    <subfield code="z">md5:57aeffe8ab5a240d5da8dcdbb0c8cf88</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">963915</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_all_final.csv</subfield>
    <subfield code="z">md5:2b9e45a6413716408ee16329d732cedd</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">548565</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_and_Uncertainties_byPoint.RData</subfield>
    <subfield code="z">md5:01d22d7f3fdf24db2b8715eff123b31c</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">175414</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_datasets_publication.RData</subfield>
    <subfield code="z">md5:cb91e2c064fbc67010c4f0e7fe9455c1</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">1365</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_element_selection.RData</subfield>
    <subfield code="z">md5:bb51d059b7b7b83fd556ade7f226b76f</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">34882</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_testresults_publication.RData</subfield>
    <subfield code="z">md5:c66d12e7a467f8d29b469c3c50cd9539</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">339701</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_uncensored_raw.RData</subfield>
    <subfield code="z">md5:fa243fc30965f586af4876af3f47e98c</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">278300</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_uncertainties.RData</subfield>
    <subfield code="z">md5:938c42aedb06c8a1e917cb4a5cd7e296</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">1124747</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_uncertainty_all_final.csv</subfield>
    <subfield code="z">md5:69d6d6a88f852954531e0647035825ac</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">1397</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Plant_uncertainty_parameters.RData</subfield>
    <subfield code="z">md5:a668071cf112f704824c0a3370a92aec</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">61064</subfield>
    <subfield code="u">https://rodare.hzdr.de/record/4073/files/Scots_pine_bark_publication.csv</subfield>
    <subfield code="z">md5:94712e244cff197107fe0eb95c1bb947</subfield>
  </datafield>
  <controlfield tag="001">4073</controlfield>
  <datafield tag="542" ind1=" " ind2=" ">
    <subfield code="l">open</subfield>
  </datafield>
  <datafield tag="520" ind1=" " ind2=" ">
    <subfield code="a">&lt;p&gt;Plant‑Soil Chemistry Dataset (Raja 2019 Field Campaign)&lt;/p&gt;

&lt;p&gt;## 1. Overview&amp;nbsp;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;This repository contains the **final, cleaned chemistry data** that were produced from the 2019 Raja field campaign.&amp;nbsp;&amp;nbsp;&lt;br&gt;
The data combine:&lt;/p&gt;

&lt;p&gt;* Plant tissue concentrations (leaf, bark, needles, &amp;hellip;) for a set of selected elements.&amp;nbsp;&amp;nbsp;&lt;br&gt;
* Corresponding soil‑till depth, point location, lithology and basic tree information.&amp;nbsp;&amp;nbsp;&lt;br&gt;
* Element‑specific relative‑standard‑deviation (RSD) uncertainties that were calculated from laboratory‑derived uncertainty parameters.&lt;/p&gt;

&lt;p&gt;All files are provided in **CSV** format (UTF‑8, `,` separator) and/or the R programming language binary format RData.&lt;/p&gt;

&lt;p&gt;*The exact set of tissue files depends on the species/plant‑parts that were sampled; the naming convention is `pl` + lower‑case abbreviation of the tissue (generated by `abbreviate(Plant, minlength = 2)` + `PlantPart`).*&lt;/p&gt;

&lt;p&gt;---&lt;/p&gt;

&lt;p&gt;## 2. Column description (common to all tables)&lt;/p&gt;

&lt;p&gt;| Column | Meaning | Type |&lt;br&gt;
|--------|---------|------|&lt;br&gt;
| `PointID` | Unique identifier for the sampling point (e.g., `NEXT‑2019‑257`). | character |&lt;br&gt;
| `X` / `Y` | Projected coordinates (Easting / Northing, EPSG 3067). | numeric |&lt;br&gt;
| `Plant` | Species name (full). | character |&lt;br&gt;
| `PlantPart` | Plant part sampled (`Leaf`, `Bark`, `Fruit`, &amp;hellip;). | character |&lt;br&gt;
| `Tissue` | Short code: `&amp;lt;abbr&amp;gt; &amp;lt;PlantPart&amp;gt;` (e.g., `Ac Leaf`). | character |&lt;br&gt;
| `Lithology_updated_Sol` | Detailed lithology description from field notes. | character |&lt;br&gt;
| `Lith_simpl` | Simplified lithology (e.g., `Mafic rocks`). | character |&lt;br&gt;
| `TillDepth_cm` | Soil till depth at the point (cm). | numeric |&lt;br&gt;
| **Element columns** (e.g. `Al`, `As`, `Ca`, &amp;hellip;) | Measured concentration **or** relative uncertainty, depending on the file (see below). | numeric |&lt;br&gt;
| `Tissue` (re‑appears) | Same as above &amp;ndash; kept for convenience. | character |&lt;/p&gt;

&lt;p&gt;### 2.1. Concentration vs. Uncertainty tables&amp;nbsp;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;* **`Plant_all_final.csv`** &amp;ndash; contains **concentrations** (units as reported by the laboratory, typically mg kg⁻&amp;sup1;).&amp;nbsp;&amp;nbsp;&lt;br&gt;
* **`Plant_uncensored_raw.RData`** &amp;ndash; contains the very original, untreated data.&amp;nbsp;&amp;nbsp;&lt;br&gt;
* **`*_uncertainty*.csv`**&amp;nbsp; &amp;ndash; the element columns have been **replaced by their relative standard deviation (RSD)**, i.e. a unit‑less proportion (`0.12` = 12 % RSD).&amp;nbsp;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;If you need both concentration **and** uncertainty for a given point, use the two files together (join on `PointID`).&lt;/p&gt;

&lt;p&gt;---&lt;/p&gt;

&lt;p&gt;## 3. Usage notes&amp;nbsp;&amp;nbsp;&lt;/p&gt;

&lt;p&gt;* **Joining concentration &amp;amp; uncertainty** &amp;ndash; the two CSVs &amp;#39;plant&amp;#39; and &amp;#39;plant_uncertainty&amp;#39; share the same column order and can be merged on `PointID`.&amp;nbsp;&amp;nbsp;&lt;br&gt;
* **Missing values** &amp;ndash; `NA` indicates either a non‑detected element or that no uncertainty parameter was available for that element.&amp;nbsp;&amp;nbsp;&lt;br&gt;
* **Spatial reference** &amp;ndash; coordinates are in **ETRS89 / Lantm&amp;auml;teriet 3006 (EPSG 3067)**, suitable for Swedish national mapping.&amp;nbsp;&amp;nbsp;&lt;br&gt;
* **Element selection** &amp;ndash; in the subdatasets not every element is present in every tissue file; only the elements that passed the QC selection criteria are kept.&amp;nbsp;&amp;nbsp;&lt;/p&gt;</subfield>
  </datafield>
</record>
28
43
views
downloads
All versions This version
Views 2828
Downloads 4343
Data volume 8.5 MB8.5 MB
Unique views 1818
Unique downloads 1414

Share

Cite as