Software Open Access

Data synchronizator of Where2test pipeline

Abdussalam, Wildan


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  <identifier identifierType="DOI">10.14278/rodare.1946</identifier>
  <creators>
    <creator>
      <creatorName>Abdussalam, Wildan</creatorName>
      <givenName>Wildan</givenName>
      <familyName>Abdussalam</familyName>
      <nameIdentifier nameIdentifierScheme="ORCID" schemeURI="http://orcid.org/">0000-0002-4948-3934</nameIdentifier>
      <affiliation>Casus</affiliation>
    </creator>
  </creators>
  <titles>
    <title>Data synchronizator of Where2test pipeline</title>
  </titles>
  <publisher>Rodare</publisher>
  <publicationYear>2022</publicationYear>
  <subjects>
    <subject>data pipeline</subject>
  </subjects>
  <dates>
    <date dateType="Issued">2022-11-10</date>
  </dates>
  <language>en</language>
  <resourceType resourceTypeGeneral="Software"/>
  <alternateIdentifiers>
    <alternateIdentifier alternateIdentifierType="url">https://rodare.hzdr.de/record/1946</alternateIdentifier>
  </alternateIdentifiers>
  <relatedIdentifiers>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsIdenticalTo">https://www.hzdr.de/publications/Publ-34430</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="DOI" relationType="IsVersionOf">10.14278/rodare.1500</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://rodare.hzdr.de/communities/health</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://rodare.hzdr.de/communities/hzdr</relatedIdentifier>
    <relatedIdentifier relatedIdentifierType="URL" relationType="IsPartOf">https://rodare.hzdr.de/communities/rodare</relatedIdentifier>
  </relatedIdentifiers>
  <version>2.0.0</version>
  <rightsList>
    <rights rightsURI="https://creativecommons.org/licenses/by/4.0/legalcode">Creative Commons Attribution 4.0 International</rights>
    <rights rightsURI="info:eu-repo/semantics/openAccess">Open Access</rights>
  </rightsList>
  <descriptions>
    <description descriptionType="Abstract">&lt;p&gt;Software to synchonise the data between various data sources and casus database server. For Unix users please use&amp;nbsp;MigrateWhere2test_2.0Unix.zip and for WIndows users please use&amp;nbsp;MigrateWhere2test_2.0Win.zip. In order to use the scripts, please use the following instructions:&lt;/p&gt;

&lt;p&gt;Windows&lt;/p&gt;

&lt;p&gt;1. Create the postgreq sql database and set the port 5432.&lt;/p&gt;

&lt;p&gt;2. Apply&amp;nbsp;&lt;a href="https://rodare.hzdr.de/api/files/0662e0ae-224f-47ea-9f3d-cf0491a11b04/w2testRegion.sql"&gt;w2testRegion.sql&lt;/a&gt;&amp;nbsp;to the Postgresql database. It creates the schema of the database.&lt;/p&gt;

&lt;p&gt;3. Create folder C:\Workspaces and unzip the unix file.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;4. Create folder in workspaces, com.com.casus.env.where2test.migration\COM_CASUS_WHERE2TEST_MIGRATION and then unzip the source file inside&amp;nbsp;COM_CASUS_WHERE2TEST_MIGRATION.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;5. Install requirement.txt. We use some python scripts for downloading and cleaning the data&lt;/p&gt;

&lt;p&gt;6. Set the memory on the file&amp;nbsp;MigrateWhere2test_run.bat&amp;nbsp;minimal to 13 GB&lt;/p&gt;

&lt;p&gt;7. Set run Develop and run the .bat&amp;nbsp;file on the folder&amp;nbsp;MigrateWhere2test_2.0Unix to run in localhost.&lt;/p&gt;

&lt;p&gt;Unix&lt;/p&gt;

&lt;p&gt;1. Create PostgreSQL with port 32771.&lt;/p&gt;

&lt;p&gt;2. Apply&amp;nbsp;&lt;a href="https://rodare.hzdr.de/api/files/0662e0ae-224f-47ea-9f3d-cf0491a11b04/w2testRegion.sql"&gt;w2testRegion.sql&lt;/a&gt;&amp;nbsp;to the Postgresql database. It creates the schema of the database.&lt;br&gt;
3. Create folder /home/wildan/Workspaces and unzip the unix file.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;4. Open the file&amp;nbsp;MigrateWhere2test/MigrateWhere2test_run.sh and change the mode &amp;quot;Default&amp;quot; by &amp;quot;Production&amp;quot;&lt;/p&gt;

&lt;p&gt;5. Create folder in workspaces, com.com.casus.env.where2test.migration.unix/COM_CASUS_WHERE2TEST_MIGRATION and then unzip the source file inside&amp;nbsp;COM_CASUS_WHERE2TEST_MIGRATION.&amp;nbsp;&lt;/p&gt;

&lt;p&gt;6. Install requirement.txt. We use some python scripts for downloading and cleaning the data&lt;/p&gt;

&lt;p&gt;7. Set the memory on the file&amp;nbsp;MigrateWhere2test_run.sh minimal to 13 GB&lt;/p&gt;

&lt;p&gt;8. run the MigrateWhere2test_run.sh in the &amp;quot;Production&amp;quot; mode.&lt;/p&gt;

&lt;p&gt;&amp;nbsp;&lt;/p&gt;</description>
  </descriptions>
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