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Data and Scripts for "Accelerating Equilibration in First-Principles Molecular Dynamics with Orbital-Free Density Functional Theory"

Fiedler, Lenz; Moldabekov, Zhandos; Shao, Xuecheng; Jiang, Kaili; Dornheim, Tobias; Pavanello, Michele; Cangi, Attila

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    <dct:description>&lt;pre&gt;&lt;em&gt;# &lt;/em&gt;Data and Scripts for &amp;quot;Accelerating Equilibration in First-Principles Molecular Dynamics with Orbital-Free Density Functional Theory&amp;quot; This dataset contains data and calculation scripts for the publication &amp;quot;Boosting first-principles molecular dynamics with orbital-free density functional theory&amp;quot;. Its goal is to enable interested parties to reproduce the experiments we have carried out. &lt;em&gt;## &lt;/em&gt;Prerequesites The following software versions are needed for the python scripts: &lt;em&gt;- &lt;/em&gt;`python`: 3.8.x &lt;em&gt;- &lt;/em&gt;`mala`: 1.1.0 (with `dftpy` installed) Further, make sure you have a working `Quantum ESPRESSO` and `VASP` installation and have downloaded additional data such as local pseudopotentials and ML models (for references, see publication). &lt;em&gt;## &lt;/em&gt;Contents &lt;em&gt;- &lt;/em&gt;`scripts/`: Example scripts for the three principal python tasks associated with out work: ML inference, trajectory analysis and OF-DFT-MD runs (via DFTPy). The scripts are general blueprints for these experiments and can be adjusted to perform all of the calculations given in the publication. &lt;em&gt;- &lt;/em&gt;`data/`: Contains raw calculation data for the three investigated systems (hydrogen, beryllium and aluminium). Since the main goal of this work is to compare OF-DFT-MD initialized and ideal crystal structure initialized trajectories and inferences, each of the three system-folders contains a `MD_ideal_crystal_structure` and `MD_ofdft_init` folder, with ideal crystal structure and OF-DFT-MD initialized data, respectively. Therein, contents may differ; e.g. aluminium contains DFT calculation data, for beryllium data is divided by system size and Nos&amp;eacute; mass, while for hydrogen data for different temperatures is given. &lt;/pre&gt;</dct:description>
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Publication date:
May 30, 2022
DOI:
10.14278/rodare.1856

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https://www.hzdr.de/publications/Publ-34767
Referenced by:
10.1103/PhysRevResearch.4.043033, https://www.hzdr.de/publications/Publ-34778, https://www.hzdr.de/publications/Publ-39797
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Version 1.0.1 10.14278/rodare.1856 May 30, 2022
Version 1.0.0 10.14278/rodare.1649 May 30, 2022
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