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openPMD-api-0.13.0.zip

openPMD-openPMD-api-4532b8d
- .appveyor.yml 4.3 kB
- .clang-tidy 920 Bytes
- .dockerignore 2.0 kB
- .editorconfig 530 Bytes
- .github
  - ISSUE_TEMPLATE
    - bug_report.md 1.2 kB
    - feature_request.md 784 Bytes
    - install_problem.md 724 Bytes
    - question.md 610 Bytes
  - ci
    - sanitizer
      - clang
        
        Leak.supp 374 Bytes
    - spack
      - compilers.yaml 4.2 kB
      - config.yaml 24 Bytes
      - packages.yaml 6.9 kB
    - spack-envs
      - clang5_nopy_nompi_h5
        
        spack.yaml 727 Bytes
      - clang5_nopy_ompi_h5_ad1_ad2_bp3
        
        spack.yaml 1.3 kB
      - clangtidy_nopy_ompi_h5_ad1_ad2
        
        spack.yaml 1.3 kB
      - gcc5_py36_ompi_h5_ad1_ad2
        
        spack.yaml 1.3 kB
  - workflows
    - dependencies
      - install_spack 624 Bytes
    - source
      - buildDoxygen 287 Bytes
      - hasEOLwhiteSpace 1.2 kB
      - hasNonASCII 1.0 kB
      - hasTabs 1.2 kB
    - source.yml 1.0 kB
    - unix.yml 7.5 kB
- .gitignore 1.7 kB
- .lgtm.yml 156 Bytes
- .readthedocs.yml 86 Bytes
- .rodare.json 4.9 kB
- CHANGELOG.rst 27.9 kB
- CMakeLists.txt 44.6 kB
- CODE_OF_CONDUCT.rst 3.4 kB
- CONTRIBUTING.rst 1.2 kB
- COPYING 35.1 kB
- COPYING.LESSER 7.7 kB
- Dockerfile 9.2 kB
- MANIFEST.in 264 Bytes
- NEWS.rst 8.7 kB
- README.md 22.0 kB
- Singularity 1.5 kB
- docs
  - Doxyfile 1.2 kB
  - Makefile 613 Bytes
  - requirements.txt 146 Bytes
  - source
    - backends
      - adios1.rst 6.5 kB
      - adios2.rst 7.5 kB
      - hdf5.rst 3.9 kB
      - json.rst 3.9 kB
      - json_example.json 2.8 kB
      - overview.rst 1.9 kB
    - citation.rst 3.5 kB
    - coc.rst 25 Bytes
    - conf.py 6.0 kB
    - details
      - adios2.json 371 Bytes
      - backendconfig.rst 3.9 kB
      - config_layout.json 153 Bytes
      - doxygen.rst 1.3 kB
      - mpi.rst 3.1 kB
      - python.rst 959 Bytes
    - dev
      - IOTask.hpp 38 Bytes
      - backend.rst 10.1 kB
      - buildoptions.rst 4.4 kB
      - contributing.rst 25 Bytes
      - dependencies.rst 1.7 kB
      - design.rst 6.9 kB
      - repostructure.rst 1.6 kB
      - sphinx.rst 2.5 kB
    - index.rst 3.3 kB
    - install
      - brew.svg 4.9 kB
      - changelog.rst 22 Bytes
      - cmake.svg 17.8 kB
      - conda.svg 1.8 kB
      - install.rst 5.5 kB
      - pypi.svg 4.4 kB
      - spack.svg 2.5 kB
      - upgrade.rst 17 Bytes
    - maintenance
      - release.rst 3.6 kB
      - requirements.txt 50 Bytes
    - openPMD.png 216.8 kB
    - usage
      - 10_streaming_read.cpp 39 Bytes
      - 10_streaming_read.py 38 Bytes
      - 10_streaming_write.cpp 40 Bytes
      - 10_streaming_write.py 39 Bytes
      - 2_read_serial.cpp 35 Bytes
      - 2_read_serial.py 34 Bytes
      - 2a_read_thetaMode_serial.cpp 46 Bytes
      - 2a_read_thetaMode_serial.py 45 Bytes
      - 3_write_serial.cpp 36 Bytes
      - 3_write_serial.py 35 Bytes
      - 3a_write_thetaMode_serial.cpp 47 Bytes
      - 3a_write_thetaMode_serial.py 46 Bytes
      - 4_read_parallel.cpp 37 Bytes
      - 4_read_parallel.py 36 Bytes
      - 5_write_parallel.cpp 38 Bytes
      - 5_write_parallel.py 37 Bytes
      - benchmarks.rst 3.3 kB
      - examples.rst 3.5 kB
      - firstread.rst 7.2 kB
      - firstwrite.rst 8.0 kB
      - parallel.rst 789 Bytes
      - serial.rst 728 Bytes
      - streaming.rst 5.2 kB
    - utilities
      - 8_benchmark_parallel.cpp 42 Bytes
      - benchmark.rst 3.5 kB
      - cli.rst 547 Bytes
  - ubuntu-package.list 97 Bytes
- examples
  - 10_streaming_read.cpp 1.8 kB
  - 10_streaming_read.py 1.0 kB
  - 10_streaming_write.cpp 1.5 kB
  - 10_streaming_write.py 902 Bytes
  - 1_structure.cpp 2.9 kB
  - 2_read_serial.cpp 3.6 kB
  - 2_read_serial.py 2.3 kB
  - 2a_read_thetaMode_serial.cpp 3.2 kB
  - 2a_read_thetaMode_serial.py 2.3 kB
  - 3_write_serial.cpp 2.9 kB
  - 3_write_serial.py 1.6 kB
  - 3a_write_thetaMode_serial.cpp 3.5 kB
  - 3a_write_thetaMode_serial.py 2.1 kB
  - 4_read_parallel.cpp 3.1 kB
  - 4_read_parallel.py 2.0 kB
  - 5_write_parallel.cpp 3.5 kB
  - 5_write_parallel.py 2.4 kB
  - 6_dump_filebased_series.cpp 7.0 kB
  - 7_extended_write_serial.cpp 8.4 kB
  - 7_extended_write_serial.py 7.3 kB
  - 8_benchmark_parallel.cpp 5.3 kB
  - 8a_benchmark_write_parallel.cpp 35.2 kB
  - 8b_benchmark_read_parallel.cpp 18.7 kB
  - 9_particle_write_serial.py 2.4 kB
- include
  - openPMD
    - ChunkInfo.hpp 2.5 kB
    - Dataset.hpp 1.7 kB
    - Datatype.hpp 28.1 kB
    - IO
      - ADIOS
        
        ADIOS1Auxiliary.hpp 8.7 kB
        
        ADIOS1FilePosition.hpp 1.2 kB
        
        ADIOS1IOHandler.hpp 2.2 kB
        
        ADIOS1IOHandlerImpl.hpp 4.7 kB
        
        ADIOS2Auxiliary.hpp 4.7 kB
        
        ADIOS2FilePosition.hpp 1.8 kB
        
        ADIOS2IOHandler.hpp 35.9 kB
        
        ParallelADIOS1IOHandler.hpp 1.9 kB
        
        ParallelADIOS1IOHandlerImpl.hpp 4.9 kB
      - AbstractFilePosition.hpp 1.0 kB
      - AbstractIOHandler.hpp 3.2 kB
      - AbstractIOHandlerHelper.hpp 2.5 kB
      - AbstractIOHandlerImpl.hpp 20.4 kB
      - AbstractIOHandlerImplCommon.hpp 7.4 kB
      - Access.hpp 1.8 kB
      - DummyIOHandler.hpp 1.6 kB
      - Format.hpp 1.6 kB
      - HDF5
        
        HDF5Auxiliary.hpp 10.7 kB
        
        HDF5FilePosition.hpp 1.1 kB
        
        HDF5IOHandler.hpp 1.4 kB
        
        HDF5IOHandlerImpl.hpp 3.8 kB
        
        ParallelHDF5IOHandler.hpp 1.6 kB
        
        ParallelHDF5IOHandlerImpl.hpp 1.6 kB
      - IOTask.hpp 16.6 kB
      - InvalidatableFile.hpp 2.7 kB
      - JSON
        
        JSONFilePosition.hpp 1.3 kB
        
        JSONIOHandler.hpp 1.4 kB
        
        JSONIOHandlerImpl.hpp 15.4 kB
    - Iteration.hpp 9.0 kB
    - IterationEncoding.hpp 1.2 kB
    - Mesh.hpp 7.9 kB
    - ParticlePatches.hpp 1.5 kB
    - ParticleSpecies.hpp 2.4 kB
    - Record.hpp 2.0 kB
    - RecordComponent.hpp 13.4 kB
    - Series.hpp 19.2 kB
    - Streaming.hpp 1.1 kB
    - UnitDimension.hpp 1.4 kB
    - auxiliary
      - Date.hpp 1.3 kB
      - DerefDynamicCast.hpp 1.8 kB
      - Environment.hpp 1.8 kB
      - Export.hpp 1.5 kB
      - Filesystem.hpp 3.2 kB
      - JSON.hpp 5.2 kB
      - Memory.hpp 5.4 kB
      - Option.hpp 4.3 kB
      - OutOfRangeMsg.hpp 2.3 kB
      - ShareRaw.hpp 2.6 kB
      - StringManip.hpp 5.8 kB
      - Variant.hpp 2.7 kB
      - VariantSrc.hpp 1.2 kB
    - backend
      - Attributable.hpp 9.6 kB
      - Attribute.hpp 10.7 kB
      - BaseRecord.hpp 10.7 kB
      - BaseRecordComponent.hpp 3.7 kB
      - Container.hpp 10.8 kB
      - MeshRecordComponent.hpp 2.6 kB
      - PatchRecord.hpp 1.5 kB
      - PatchRecordComponent.hpp 3.9 kB
      - Writable.hpp 2.9 kB
    - benchmark
      - MemoryProfiler.hpp 2.6 kB
      - Timer.hpp 2.7 kB
      - mpi
        
        BlockSlicer.hpp 1.7 kB
        
        DatasetFiller.hpp 3.3 kB
        
        MPIBenchmark.hpp 18.0 kB
        
        MPIBenchmarkReport.hpp 10.2 kB
        
        OneDimensionalBlockSlicer.hpp 1.4 kB
        
        RandomDatasetFiller.hpp 4.2 kB
    - binding
      - python
        
        Numpy.hpp 8.0 kB
        
        UnitDimension.hpp 1.8 kB
        
        Variant.hpp 1.8 kB
    - cli
      - ls.hpp 3.8 kB
    - config.hpp.in 1.2 kB
    - helper
      - list_series.hpp 1.5 kB
    - openPMD.hpp 2.2 kB
    - version.hpp 3.1 kB
- openPMD.pc.in 493 Bytes
- openPMDConfig.cmake.in 1.9 kB
- pyproject.toml 105 Bytes
- requirements.txt 21 Bytes
- setup.py 7.8 kB
- share
  - openPMD
    - cmake
      - FindADIOS.cmake 12.5 kB
    - download_samples.ps1 1.6 kB
    - download_samples.sh 1.1 kB
    - thirdParty
      - catch2
        
        include
        
        catch2
        
        catch.hpp 508.2 kB
      - json
        
        CMakeLists.txt 5.2 kB
        
        LICENSE.MIT 1.1 kB
        
        cmake
        
        config.cmake.in 710 Bytes
        
        download_test_data.cmake 3.2 kB
        
        nlohmann_jsonConfigVersion.cmake.in 709 Bytes
        
        pkg-config.pc.in 145 Bytes
        
        nlohmann_json.natvis 2.0 kB
        
        single_include
        
        nlohmann
        
        json.hpp 926.2 kB
      - pybind11
        
        CMakeLists.txt 10.0 kB
        
        LICENSE 1.7 kB
        
        MANIFEST.in 256 Bytes
        
        README.rst 7.3 kB
        
        include
        
        pybind11
        
        attr.h 21.4 kB
        
        buffer_info.h 6.1 kB
        
        cast.h 94.0 kB
        
        chrono.h 8.2 kB
        
        common.h 120 Bytes
        
        complex.h 2.0 kB
        
        detail
        
        class.h 27.8 kB
        
        common.h 39.9 kB
        
        descr.h 3.6 kB
        
        init.h 16.4 kB
        
        internals.h 16.4 kB
        
        typeid.h 1.5 kB
        
        eigen.h 29.1 kB
        
        embed.h 7.8 kB
        
        eval.h 5.1 kB
        
        functional.h 3.7 kB
        
        iostream.h 6.0 kB
        
        numpy.h 69.3 kB
        
        operators.h 9.1 kB
        
        options.h 2.0 kB
        
        pybind11.h 107.8 kB
        
        pytypes.h 65.8 kB
        
        stl.h 14.1 kB
        
        stl_bind.h 23.4 kB
        
        pybind11
        
        __init__.py 217 Bytes
        
        __main__.py 1.2 kB
        
        _version.py 202 Bytes
        
        _version.pyi 137 Bytes
        
        commands.py 663 Bytes
        
        py.typed 0 Bytes
        
        setup_helpers.py 15.1 kB
        
        setup_helpers.pyi 1.9 kB
        
        tools
        
        FindCatch.cmake 2.3 kB
        
        FindEigen3.cmake 3.0 kB
        
        FindPythonLibsNew.cmake 9.9 kB
        
        check-style.sh 1.4 kB
        
        cmake_uninstall.cmake.in 952 Bytes
        
        libsize.py 1.1 kB
        
        pybind11Common.cmake 14.0 kB
        
        pybind11Config.cmake.in 7.0 kB
        
        pybind11NewTools.cmake 8.2 kB
        
        pybind11Tools.cmake 6.6 kB
        
        pyproject.toml 94 Bytes
        
        setup_global.py.in 1.8 kB
        
        setup_main.py.in 915 Bytes
      - variant
        
        include
        
        mpark
        
        variant.hpp 102.6 kB
    - validate_files.sh 1.2 kB
- spack.yaml 351 Bytes
- src
  - ChunkInfo.cpp 1.8 kB
  - Dataset.cpp 2.7 kB
  - Datatype.cpp 11.1 kB
  - Format.cpp 2.8 kB
  - IO
    - ADIOS
      - ADIOS1IOHandler.cpp 11.8 kB
      - ADIOS2Auxiliary.cpp 6.2 kB
      - ADIOS2IOHandler.cpp 68.4 kB
      - CommonADIOS1IOHandler.cpp 62.4 kB
      - ParallelADIOS1IOHandler.cpp 13.9 kB
    - AbstractIOHandlerHelper.cpp 3.8 kB
    - DummyIOHandler.cpp 1.3 kB
    - HDF5
      - HDF5IOHandler.cpp 73.1 kB
      - ParallelHDF5IOHandler.cpp 4.3 kB
    - IOTask.cpp 1.1 kB
    - InvalidatableFile.cpp 2.2 kB
    - JSON
      - JSONFilePosition.cpp 195 Bytes
      - JSONIOHandler.cpp 1.3 kB
      - JSONIOHandlerImpl.cpp 50.7 kB
  - Iteration.cpp 18.0 kB
  - IterationEncoding.cpp 1.3 kB
  - Mesh.cpp 11.6 kB
  - ParticlePatches.cpp 2.6 kB
  - ParticleSpecies.cpp 5.0 kB
  - Record.cpp 4.2 kB
  - RecordComponent.cpp 9.1 kB
  - Series.cpp 44.5 kB
  - auxiliary
    - Date.cpp 1.6 kB
    - Filesystem.cpp 4.9 kB
    - JSON.cpp 3.3 kB
  - backend
    - Attributable.cpp 10.0 kB
    - BaseRecordComponent.cpp 1.9 kB
    - MeshRecordComponent.cpp 2.7 kB
    - PatchRecord.cpp 3.4 kB
    - PatchRecordComponent.cpp 3.3 kB
    - Writable.cpp 1.2 kB
  - benchmark
    - mpi
      - OneDimensionalBlockSlicer.cpp 2.7 kB
  - binding
    - python
      - Access.cpp 1.2 kB
      - Attributable.cpp 15.6 kB
      - BaseRecord.cpp 2.4 kB
      - BaseRecordComponent.cpp 2.0 kB
      - ChunkInfo.cpp 2.2 kB
      - Container.cpp 7.7 kB
      - Dataset.cpp 2.7 kB
      - Datatype.cpp 2.9 kB
      - Helper.cpp 1.7 kB
      - Iteration.cpp 3.0 kB
      - IterationEncoding.cpp 1.2 kB
      - Mesh.cpp 3.9 kB
      - MeshRecordComponent.cpp 2.2 kB
      - ParticlePatches.cpp 1.5 kB
      - ParticleSpecies.cpp 1.4 kB
      - PatchRecord.cpp 1.6 kB
      - PatchRecordComponent.cpp 7.9 kB
      - Record.cpp 2.2 kB
      - RecordComponent.cpp 26.8 kB
      - Series.cpp 8.4 kB
      - UnitDimension.cpp 1.4 kB
      - openPMD.cpp 4.0 kB
      - openpmd_api
        
        __init__.py 266 Bytes
        
        ls
        
        __init__.py 73 Bytes
        
        __main__.py 484 Bytes
  - cli
    - ls.cpp 1.1 kB
  - config.cpp 1.6 kB
  - helper
    - list_series.cpp 4.6 kB
  - version.cpp 1.9 kB
- test
  - AuxiliaryTest.cpp 15.4 kB
  - CatchMain.cpp 56 Bytes
  - CatchRunner.cpp 759 Bytes
  - CoreTest.cpp 32.2 kB
  - ParallelIOTest.cpp 31.5 kB
  - SerialIOTest.cpp 130.3 kB
  - python
    - unittest
      - API
        
        APITest.py 64.2 kB
        
        __init__.py 0 Bytes
      - Test.py 687 Bytes
      - TestUtilities
        
        TestUtilities.py 799 Bytes
        
        __init__.py 0 Bytes
      - __init__.py 0 Bytes